5MBQ image
Deposition Date 2016-11-08
Release Date 2017-04-12
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5MBQ
Keywords:
Title:
CeuE (H227A variant) a periplasmic protein from Campylobacter jejuni
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.33 Å
R-Value Free:
0.19
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Enterochelin uptake periplasmic binding protein
Gene (Uniprot):ceuE
Mutations:H227A
Chain IDs:A, B, C
Chain Length:291
Number of Molecules:3
Biological Source:Campylobacter jejuni
Primary Citation
Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep 7 45941 45941 (2017)
PMID: 28383577 DOI: 10.1038/srep45941

Abstact

Bacteria use siderophores to mediate the transport of essential Fe(III) into the cell. In Campylobacter jejuni the periplasmic binding protein CeuE, an integral part of the Fe(III) transport system, has adapted to bind tetradentate siderophores using a His and a Tyr side chain to complete the Fe(III) coordination. A series of tetradentate siderophore mimics was synthesized in which the length of the linker between the two iron-binding catecholamide units was increased from four carbon atoms (4-LICAM4-) to five, six and eight (5-, 6-, 8-LICAM4-, respectively). Co-crystal structures with CeuE showed that the inter-planar angles between the iron-binding catecholamide units in the 5-, 6- and 8-LICAM4- structures are very similar (111°, 110° and 110°) and allow for an optimum fit into the binding pocket of CeuE, the inter-planar angle in the structure of 4-LICAM4- is significantly smaller (97°) due to restrictions imposed by the shorter linker. Accordingly, the protein-binding affinity was found to be slightly higher for 5- compared to 4-LICAM4- but decreases for 6- and 8-LICAM4-. The optimum linker length of five matches that present in natural siderophores such as enterobactin and azotochelin. Site-directed mutagenesis was used to investigate the relative importance of the Fe(III)-coordinating residues H227 and Y288.

Legend

Protein

Chemical

Disease

Primary Citation of related structures