5M95 image
Entry Detail
PDB ID:
5M95
Title:
STAPHYLOCOCCUS CAPITIS DIVALENT METAL ION TRANSPORTER (DMT) IN COMPLEX WITH MANGANESE
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2016-10-31
Release Date:
2016-11-30
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Divalent metal cation transporter MntH
Chain IDs:A, D (auth: C)
Chain Length:415
Number of Molecules:2
Biological Source:Staphylococcus capitis
Polymer Type:polypeptide(L)
Description:CAMELID ANTIBODY FRAGMENT, NANOBODY
Chain IDs:B, C (auth: D)
Chain Length:124
Number of Molecules:2
Biological Source:Lama glama
Ligand Molecules
Primary Citation
Crystal Structure Of A Slc11 (Nramp) Transporter Reveals The Basis For Transition-Metal Ion Transport.
Nat.Struct.Mol.Biol. 21 990 ? (2014)
PMID: 25326704 DOI: 10.1038/NSMB.2904

Abstact

Members of the SLC11 (NRAMP) family transport iron and other transition-metal ions across cellular membranes. These membrane proteins are present in all kingdoms of life with a high degree of sequence conservation. To gain insight into the determinants of ion selectivity, we have determined the crystal structure of Staphylococcus capitis DMT (ScaDMT), a close prokaryotic homolog of the family. ScaDMT shows a familiar architecture that was previously identified in the amino acid permease LeuT. The protein adopts an inward-facing conformation with a substrate-binding site located in the center of the transporter. This site is composed of conserved residues, which coordinate Mn2+, Fe2+ and Cd2+ but not Ca2+. Mutations of interacting residues affect ion binding and transport in both ScaDMT and human DMT1. Our study thus reveals a conserved mechanism for transition-metal ion selectivity within the SLC11 family.

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Primary Citation of related structures