5M6S image
Deposition Date 2016-10-25
Release Date 2017-01-11
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5M6S
Title:
folding intermediate of spectrin R16
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:spectrin
Chain IDs:A
Chain Length:169
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Cotranslational folding of spectrin domains via partially structured states.
Nat. Struct. Mol. Biol. 24 221 225 (2017)
PMID: 28112730 DOI: 10.1038/nsmb.3355

Abstact

How do the key features of protein folding, elucidated from studies on native, isolated proteins, manifest in cotranslational folding on the ribosome? Using a well-characterized family of homologous α-helical proteins with a range of biophysical properties, we show that spectrin domains can fold vectorially on the ribosome and may do so via a pathway different from that of the isolated domain. We use cryo-EM to reveal a folded or partially folded structure, formed in the vestibule of the ribosome. Our results reveal that it is not possible to predict which domains will fold within the ribosome on the basis of the folding behavior of isolated domains; instead, we propose that a complex balance of the rate of folding, the rate of translation and the lifetime of folded or partly folded states will determine whether folding occurs cotranslationally on actively translating ribosomes.

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Primary Citation of related structures