5M02 image
Deposition Date 2016-10-03
Release Date 2017-12-20
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5M02
Keywords:
IMMUNE SYSTEM
Title:
Crystal structure of murine P14 TCR / H-2Db with PF, modified gp33 peptide from LCMV
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Lymphocytic choriomeningitis virus (Taxon ID: 11623)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.75 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
5M02 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:H-2 class I histocompatibility antigen, D-B alpha chain
Gene (Uniprot):H2-D1
Chain IDs:A
Chain Length:276
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:P01899 Pfam ID:PF00129, PF07654
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2m
Chain IDs:B
Chain Length:119
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:P01887 Pfam ID:PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein Trav14-1,T-cell receptor alpha chain C region
Gene (Uniprot):Trav14-1, Trac
Chain IDs:C (auth: G)
Chain Length:205
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:A0A0G2JF94,P01849 Pfam ID:PF07686, PF09291
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell receptor beta chain V region C5,T-cell receptor beta-2 chain C region
Chain IDs:D (auth: H)
Chain Length:238
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:P04213,P01851 Pfam ID:PF07686, PF07654
Polymer Type:polypeptide(L)
Molecule:LCMV-DERIVED GP33 ALTERED PEPTIDE LIGAND PF
Chain IDs:E (auth: P)
Chain Length:9
Number of Molecules:1
Biological Source:Lymphocytic choriomeningitis virus
Ligand Molecules
GOL
Primary Citation
Thernary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant
To Be Published ? ? ? (?)
Primary Citation of related structures
5M02