5LW7 image
Entry Detail
PDB ID:
5LW7
Keywords:
Title:
S. solfataricus ABCE1 post-splitting state
Biological Source:
PDB Version:
Deposition Date:
2016-09-15
Release Date:
2016-11-16
Method Details:
Experimental Method:
Resolution:
17.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ABC transporter ATP-binding protein
Mutations:E238A E485A
Chain IDs:A (auth: B)
Chain Length:593
Number of Molecules:1
Biological Source:Pyrococcus abyssi (strain GE5 / Orsay)
Ligand Molecules
Primary Citation
Structure of the ribosome post-recycling complex probed by chemical cross-linking and mass spectrometry.
Nat Commun 7 13248 13248 (2016)
PMID: 27824037 DOI: 10.1038/ncomms13248

Abstact

Ribosome recycling orchestrated by the ATP binding cassette (ABC) protein ABCE1 can be considered as the final-or the first-step within the cyclic process of protein synthesis, connecting translation termination and mRNA surveillance with re-initiation. An ATP-dependent tweezer-like motion of the nucleotide-binding domains in ABCE1 transfers mechanical energy to the ribosome and tears the ribosome subunits apart. The post-recycling complex (PRC) then re-initiates mRNA translation. Here, we probed the so far unknown architecture of the 1-MDa PRC (40S/30S·ABCE1) by chemical cross-linking and mass spectrometry (XL-MS). Our study reveals ABCE1 bound to the translational factor-binding (GTPase) site with multiple cross-link contacts of the helix-loop-helix motif to the S24e ribosomal protein. Cross-linking of the FeS cluster domain to the ribosomal protein S12 substantiates an extreme lever-arm movement of the FeS cluster domain during ribosome recycling. We were thus able to reconstitute and structurally analyse a key complex in the translational cycle, resembling the link between translation initiation and ribosome recycling.

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Primary Citation of related structures