5LUV image
Deposition Date 2016-09-12
Release Date 2017-02-22
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5LUV
Title:
Short LOV protein W619_1 in apo-state
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
I 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Putative PAS/PAC sensor protein
Gene (Uniprot):PputW619_0812
Chain IDs:A, B
Chain Length:166
Number of Molecules:2
Biological Source:Pseudomonas putida
Primary Citation
Structure of a LOV protein in apo-state and implications for construction of LOV-based optical tools.
Sci Rep 7 42971 42971 (2017)
PMID: 28211532 DOI: 10.1038/srep42971

Abstact

Unique features of Light-Oxygen-Voltage (LOV) proteins like relatively small size (~12-19 kDa), inherent modularity, highly-tunable photocycle and oxygen-independent fluorescence have lately been exploited for the generation of optical tools. Structures of LOV domains reported so far contain a flavin chromophore per protein molecule. Here we report two new findings on the short LOV protein W619_1-LOV from Pseudomonas putida. First, the apo-state crystal structure of W619_1-LOV at 2.5 Å resolution reveals conformational rearrangements in the secondary structure elements lining the chromophore pocket including elongation of the Fα helix, shortening of the Eα-Fα loop and partial unfolding of the Eα helix. Second, the apo W619_1-LOV protein binds both natural and structurally modified flavin chromophores. Remarkably different photophysical and photochemical properties of W619_1-LOV bound to 7-methyl-8-chloro-riboflavin (8-Cl-RF) and lumichrome imply application of these variants as novel optical tools as they offer advantages such as no adduct state formation, and a broader choice of wavelengths for in vitro studies.

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Primary Citation of related structures