ISDA: 5LPQ

Deposition Date 2016-08-14

Release Date 2017-08-30

Last Version Date 2024-01-10

Entry Detail

PDB ID:

5LPQ

Keywords:

TRANSFERASE

Title:

tRNA guanine Transglycosylase (TGT) in co-crystallized complex (space group P21) with 6-amino-4-(2-((3aR,4R,6R,6aR)-6-methoxy-2,2-dimethyltetrahydrofuro[3,4-d][1,3]dioxol-4-yl)ethyl)-2-(methylamino)-1H-imidazo[4,5-g]quinazolin-8(7H)-one

Biological Source:

Source Organism:

Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) (Taxon ID: 264203)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.52 Å

R-Value Free:

0.26

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Queuine tRNA-ribosyltransferase
Gene (Uniprot):tgt
Chain IDs:A, B
Chain Length:386
Number of Molecules:2
Biological Source:Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)

UniProt ID:P28720 Pfam ID:PF01702 EC:2.4.2.29

Ligand Molecules

72C

Primary Citation

Carbohydrate-based Inhibitors targeting the Ribose-34 pocket of Z.mobilis TGT and changing the oligomeric state of the homodimer

Ehrmann, F.R, Botzanowski, T, Pfaffender, T, Heine, A, Diederich, F, Sanglier-Cianferani, S, Klebe, G.Show

To be published ? ? ? (?)

Primary Citation of related structures