5LPJ image
Deposition Date 2016-08-13
Release Date 2017-08-16
Last Version Date 2024-05-01
Entry Detail
PDB ID:
5LPJ
Keywords:
TRANSCRIPTION
Title:
Crystal structure of the bromodomain of human CREBBP bound to the inhibitor XDM1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.65 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 21 21 21
5LPJ validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CREB-binding protein
Gene (Uniprot):CREBBP
Chain IDs:A
Chain Length:119
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q92793 Pfam ID:PF00439 EC:2.3.1.48
Ligand Molecules
XDM
Primary Citation
Beyond the BET Family: Targeting CBP/p300 with 4-Acyl Pyrroles.
Angew. Chem. Int. Ed. Engl. 56 12476 12480 (2017)
PMID: 28766825 DOI: 10.1002/anie.201705516

Abstact

Bromodomain and extra-terminal domain (BET) inhibitors are widely used both as chemical tools to study the biological role of their targets in living organisms and as candidates for drug development against several cancer variants and human disorders. However, non-BET bromodomains such as those in p300 and CBP are less studied. XDM-CBP is a highly potent and selective inhibitor for the bromodomains of CBP and p300 derived from a pan-selective BET BRD-binding fragment. Along with X-ray crystal-structure analysis and thermodynamic profiling, XDM-CBP was used in screenings of several cancer cell lines in vitro to study its inhibitory potential on cancer cell proliferation. XDM-CBP is demonstrated to be a potent and selective CBP/p300 inhibitor that acts on specific cancer cell lines, in particular malignant melanoma, breast cancer, and leukemia.

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Disease

Primary Citation of related structures
5NRW