5LM1 image
Entry Detail
PDB ID:
5LM1
Keywords:
Title:
Crystal Structure of HD-PTP phosphatase in complex with UBAP1
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-07-28
Release Date:
2016-11-30
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Tyrosine-protein phosphatase non-receptor type 23
Chain IDs:A
Chain Length:352
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:UBAP-1
Chain IDs:B
Chain Length:20
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural Basis for Selective Interaction between the ESCRT Regulator HD-PTP and UBAP1.
Structure 24 2115 2126 (2016)
PMID: 27839950 DOI: 10.1016/j.str.2016.10.006

Abstact

Endosomal sorting complexes required for transport (ESCRTs) are essential for ubiquitin-dependent degradation of mitogenic receptors, a process often compromised in cancer pathologies. Sorting of ubiquinated receptors via ESCRTs is controlled by the tumor suppressor phosphatase HD-PTP. The specific interaction between HD-PTP and the ESCRT-I subunit UBAP1 is critical for degradation of growth factor receptors and integrins. Here, we present the structural characterization by X-ray crystallography and double electron-electron resonance spectroscopy of the coiled-coil domain of HD-PTP and its complex with UBAP1. The coiled-coil domain adopts an unexpected open and rigid conformation that contrasts with the closed and flexible coiled-coil domain of the related ESCRT regulator Alix. The HD-PTP:UBAP1 structure identifies the molecular determinants of the interaction and provides a molecular basis for the specific functional cooperation between HD-PTP and UBAP1. Our findings provide insights into the molecular mechanisms of regulation of ESCRT pathways that could be relevant to anticancer therapies.

Legend

Protein

Chemical

Disease

Primary Citation of related structures