5LJO image
Deposition Date 2016-07-19
Release Date 2016-10-12
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5LJO
Title:
E. coli BAM complex (BamABCDE) by cryoEM
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Outer membrane protein assembly factor BamA
Chain IDs:E (auth: A)
Chain Length:783
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Outer membrane protein assembly factor BamB
Gene (Uniprot):bamB
Chain IDs:A (auth: B)
Chain Length:371
Number of Molecules:1
Biological Source:Escherichia coli K12
Polymer Type:polypeptide(L)
Molecule:Outer membrane protein assembly factor BamC
Gene (Uniprot):bamC
Chain IDs:B (auth: C)
Chain Length:165
Number of Molecules:1
Biological Source:Escherichia coli K12
Polymer Type:polypeptide(L)
Molecule:Outer membrane protein assembly factor BamD
Chain IDs:C (auth: D)
Chain Length:218
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Outer membrane protein assembly factor BamE
Chain IDs:D (auth: E)
Chain Length:87
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Lateral opening in the intact beta-barrel assembly machinery captured by cryo-EM.
Nat Commun 7 12865 12865 (2016)
PMID: 27686148 DOI: 10.1038/ncomms12865

Abstact

The β-barrel assembly machinery (BAM) is a ∼203 kDa complex of five proteins (BamA-E), which is essential for viability in E. coli. BAM promotes the folding and insertion of β-barrel proteins into the outer membrane via a poorly understood mechanism. Several current models suggest that BAM functions through a 'lateral gating' motion of the β-barrel of BamA. Here we present a cryo-EM structure of the BamABCDE complex, at 4.9 Å resolution. The structure is in a laterally open conformation showing that gating is independent of BamB binding. We describe conformational changes throughout the complex and interactions between BamA, B, D and E, and the detergent micelle that suggest communication between BAM and the lipid bilayer. Finally, using an enhanced reconstitution protocol and functional assays, we show that for the outer membrane protein OmpT, efficient folding in vitro requires lateral gating in BAM.

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Primary Citation of related structures