5LJN image
Deposition Date 2016-07-18
Release Date 2016-08-24
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5LJN
Keywords:
Title:
Structure of the HOIP PUB domain bound to SPATA2 PIM peptide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 43
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase RNF31
Gene (Uniprot):RNF31
Chain IDs:A, B
Chain Length:173
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Spermatogenesis-associated protein 2
Gene (Uniprot):SPATA2
Chain IDs:C, D
Chain Length:8
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
SPATA2 Links CYLD to LUBAC, Activates CYLD, and Controls LUBAC Signaling.
Mol.Cell 63 990 1005 (2016)
PMID: 27591049 DOI: 10.1016/j.molcel.2016.08.001

Abstact

The linear ubiquitin chain assembly complex (LUBAC) regulates immune signaling, and its function is regulated by the deubiquitinases OTULIN and CYLD, which associate with the catalytic subunit HOIP. However, the mechanism through which CYLD interacts with HOIP is unclear. We here show that CYLD interacts with HOIP via spermatogenesis-associated protein 2 (SPATA2). SPATA2 interacts with CYLD through its non-canonical PUB domain, which binds the catalytic CYLD USP domain in a CYLD B-box-dependent manner. Significantly, SPATA2 binding activates CYLD-mediated hydrolysis of ubiquitin chains. SPATA2 also harbors a conserved PUB-interacting motif that selectively docks into the HOIP PUB domain. In cells, SPATA2 is recruited to the TNF receptor 1 signaling complex and is required for CYLD recruitment. Loss of SPATA2 increases ubiquitination of LUBAC substrates and results in enhanced NOD2 signaling. Our data reveal SPATA2 as a high-affinity binding partner of CYLD and HOIP, and a regulatory component of LUBAC-mediated NF-κB signaling.

Legend

Protein

Chemical

Disease

Primary Citation of related structures