5LBK image
Entry Detail
PDB ID:
5LBK
Keywords:
Title:
Crystal structure of the N-domain of HMA8, a copper-transporting P-type ATPase
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-06-16
Release Date:
2017-08-02
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Copper-transporting ATPase PAA2, chloroplastic
Chain IDs:A, B
Chain Length:136
Number of Molecules:2
Biological Source:Arabidopsis thaliana
Primary Citation
Structural Insights into the Nucleotide-Binding Domains of the P1B-type ATPases HMA6 and HMA8 from Arabidopsis thaliana.
PLoS ONE 11 e0165666 e0165666 (2016)
PMID: 27802305 DOI: 10.1371/journal.pone.0165666

Abstact

Copper is a crucial ion in cells, but needs to be closely controlled due to its toxic potential and ability to catalyse the formation of radicals. In chloroplasts, an important step for the proper functioning of the photosynthetic electron transfer chain is the delivery of copper to plastocyanin in the thylakoid lumen. The main route for copper transport to the thylakoid lumen is driven by two PIB-type ATPases, Heavy Metal ATPase 6 (HMA6) and HMA8, located in the inner membrane of the chloroplast envelope and in the thylakoid membrane, respectively. Here, the crystal structures of the nucleotide binding domain of HMA6 and HMA8 from Arabidopsis thaliana are reported at 1.5Å and 1.75Å resolution, respectively, providing the first structural information on plants Cu+-ATPases. The structures reveal a compact domain, with two short helices on both sides of a twisted beta-sheet. A double mutant, aiding in the crystallization, provides a new crystal contact, but also avoids an internal clash highlighting the benefits of construct modifications. Finally, the histidine in the HP motif of the isolated domains, unable to bind ATP, shows a side chain conformation distinct from nucleotide bound structures.

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