5L8R image
Deposition Date 2016-06-08
Release Date 2017-03-15
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5L8R
Keywords:
Title:
The structure of plant photosystem I super-complex at 2.6 angstrom resolution.
Biological Source:
Source Organism:
Pisum sativum (Taxon ID: 3888)
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lhca1
Chain IDs:A (auth: 1)
Chain Length:193
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):lhaB
Chain IDs:B (auth: 2)
Chain Length:269
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein 3, chloroplastic
Gene (Uniprot):lhca3
Chain IDs:C (auth: 3)
Chain Length:275
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein P4, chloroplastic
Gene (Uniprot):lhcA-P4
Chain IDs:D (auth: 4)
Chain Length:198
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A1
Gene (Uniprot):psaA
Chain IDs:E (auth: A)
Chain Length:758
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A2
Gene (Uniprot):psaB
Chain IDs:F (auth: B)
Chain Length:734
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur center
Gene (Uniprot):psaC
Chain IDs:G (auth: C)
Chain Length:81
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaD
Chain IDs:H (auth: D)
Chain Length:143
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative uncharacterized protein
Chain IDs:I (auth: E)
Chain Length:66
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit III
Chain IDs:J (auth: F)
Chain Length:154
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaG
Chain IDs:K (auth: G)
Chain Length:97
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit VI
Chain IDs:L (auth: H)
Chain Length:88
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit VIII
Gene (Uniprot):psaI
Chain IDs:M (auth: I)
Chain Length:40
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IX
Gene (Uniprot):psaJ
Chain IDs:N (auth: J)
Chain Length:42
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit X psaK
Chain IDs:O (auth: K)
Chain Length:80
Number of Molecules:1
Biological Source:Pisum sativum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative uncharacterized protein
Chain IDs:P (auth: L)
Chain Length:157
Number of Molecules:1
Biological Source:Pisum sativum
Primary Citation
Structure of the plant photosystem I supercomplex at 2.6 angstrom resolution.
Nat Plants 3 17014 17014 (2017)
PMID: 28248295 DOI: 10.1038/nplants.2017.14

Abstact

Four elaborate membrane complexes carry out the light reaction of oxygenic photosynthesis. Photosystem I (PSI) is one of two large reaction centres responsible for converting light photons into the chemical energy needed to sustain life. In the thylakoid membranes of plants, PSI is found together with its integral light-harvesting antenna, light-harvesting complex I (LHCI), in a membrane supercomplex containing hundreds of light-harvesting pigments. Here, we report the crystal structure of plant PSI-LHCI at 2.6 Å resolution. The structure reveals the configuration of PsaK, a core subunit important for state transitions in plants, a conserved network of water molecules surrounding the electron transfer centres and an elaborate structure of lipids bridging PSI and its LHCI antenna. We discuss the implications of the structure for energy transfer and the evolution of PSI.

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