5L85 image
Deposition Date 2016-06-07
Release Date 2016-08-31
Last Version Date 2024-06-19
Entry Detail
PDB ID:
5L85
Title:
Solution structure of the complex between human ZNHIT3 and NUFIP1 proteins
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
160
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Zinc finger HIT domain-containing protein 3
Gene (Uniprot):ZNHIT3
Chain IDs:A
Chain Length:75
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nuclear fragile X mental retardation-interacting protein 1
Gene (Uniprot):NUFIP1
Chain IDs:B
Chain Length:34
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural Features of the Box C/D snoRNP Pre-assembly Process Are Conserved through Species.
Structure 24 1693 1706 (2016)
PMID: 27594683 DOI: 10.1016/j.str.2016.07.016

Abstact

Box C/D small nucleolar ribonucleoparticles (snoRNPs) support 2'-O-methylation of several target RNAs. They share a common set of four core proteins (SNU13, NOP58, NOP56, and FBL) that are assembled on different guide small nucleolar RNAs. Assembly of these entities involves additional protein factors that are absent in the mature active particle. In this context, the platform protein NUFIP1/Rsa1 establishes direct and simultaneous contacts with core proteins and with the components of the assembly machinery. Here, we solve the nuclear magnetic resonance (NMR) structure of a complex resulting from interaction between protein fragments of human NUFIP1 and its cofactor ZNHIT3, and emphasize their imbrication. Using yeast two-hybrid and complementation assays, protein co-expression, isothermal titration calorimetry, and NMR, we demonstrate that yeast and human complexes involving NUFIP1/Rsa1p, ZNHIT3/Hit1p, and SNU13/Snu13p share strong structural similarities, suggesting that the initial steps of the box C/D snoRNP assembly process are conserved among species.

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Primary Citation of related structures
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