5L83 image
Deposition Date 2016-06-06
Release Date 2016-08-03
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5L83
Keywords:
Title:
Complex of potato ATG8 protein with a peptide from Irish potato famine pathogen effector protein PexRD54
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 41 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Autophagy-related protein
Gene (Uniprot):ATG8CL
Chain IDs:C (auth: A), D (auth: B)
Chain Length:112
Number of Molecules:2
Biological Source:Solanum tuberosum
Polymer Type:polypeptide(L)
Molecule:ASP-TRP-GLU-ILE-VAL
Chain IDs:A (auth: C), B (auth: D)
Chain Length:5
Number of Molecules:2
Biological Source:Phytophthora infestans
Primary Citation
Structural Basis of Host Autophagy-related Protein 8 (ATG8) Binding by the Irish Potato Famine Pathogen Effector Protein PexRD54.
J.Biol.Chem. 291 20270 20282 (2016)
PMID: 27458016 DOI: 10.1074/jbc.M116.744995

Abstact

Filamentous plant pathogens deliver effector proteins to host cells to promote infection. The Phytophthora infestans RXLR-type effector PexRD54 binds potato ATG8 via its ATG8 family-interacting motif (AIM) and perturbs host-selective autophagy. However, the structural basis of this interaction remains unknown. Here, we define the crystal structure of PexRD54, which includes a modular architecture, including five tandem repeat domains, with the AIM sequence presented at the disordered C terminus. To determine the interface between PexRD54 and ATG8, we solved the crystal structure of potato ATG8CL in complex with a peptide comprising the effector's AIM sequence, and we established a model of the full-length PexRD54-ATG8CL complex using small angle x-ray scattering. Structure-informed deletion of the PexRD54 tandem domains reveals retention of ATG8CL binding in vitro and in planta This study offers new insights into structure/function relationships of oomycete RXLR effectors and how these proteins engage with host cell targets to promote disease.

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Primary Citation of related structures