5L75 image
Deposition Date 2016-06-01
Release Date 2017-08-16
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5L75
Title:
A protein structure
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
R-Value Free:
0.32
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
I 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Lipopolysaccharide ABC transporter, ATP-binding protein LptB
Chain IDs:A, B
Chain Length:241
Number of Molecules:2
Biological Source:Klebsiella pneumoniae IS22
Polymer Type:polypeptide(L)
Molecule:FIG000988: Predicted permease
Chain IDs:C (auth: F)
Chain Length:365
Number of Molecules:1
Biological Source:Klebsiella pneumoniae IS22
Polymer Type:polypeptide(L)
Molecule:FIG000906: Predicted Permease
Chain IDs:D (auth: G)
Chain Length:360
Number of Molecules:1
Biological Source:Klebsiella pneumoniae IS22
Ligand Molecules
Primary Citation
Structural and functional insights into the lipopolysaccharide ABC transporter LptB2FG.
Nat Commun 8 222 222 (2017)
PMID: 28790314 DOI: 10.1038/s41467-017-00273-5

Abstact

The cell surface of most Gram-negative bacteria contains lipopolysaccharide that is essential for their viability and drug resistance. A 134-kDa protein complex LptB2FG is unique among ATP-binding cassette transporters because it extracts lipopolysaccharide from the external leaflet of the inner membrane and propels it along a filament that extends across the periplasm to directly deliver lipopolysaccharide into the external leaflet of the outer membrane. Here we report the crystal structure of the lipopolysaccharide transporter LptB2FG from Klebsiella pneumoniae, in which both LptF and LptG are composed of a β-jellyroll-like periplasmic domain and six α-helical segments in the transmembrane domain. LptF and LptG form a central cavity containing highly conserved hydrophobic residues. Structural and functional studies suggest that LptB2FG uses an alternating lateral access mechanism to extract lipopolysaccharide and traffic it along the hydrophobic cavity toward the transporter's periplasmic domains.Lipopolysaccharides (LPS) are synthesized at the periplasmic side of the inner membrane of Gram-negative bacteria and are then extracted by the LptB2FG complex during the first step of LPS transport to the outer membrane. Here the authors present the LptB2FG structure, which supports an alternating lateral access mechanism for LPS extraction.

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Primary Citation of related structures