5L3Y image
Deposition Date 2016-05-24
Release Date 2016-07-20
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5L3Y
Title:
Designed Artificial Cupredoxins
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.24
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Streptavidin
Chain IDs:A
Chain Length:159
Number of Molecules:1
Biological Source:Streptomyces avidinii
Ligand Molecules
Primary Citation
Modular Artificial Cupredoxins.
J.Am.Chem.Soc. 138 9073 9076 (2016)
PMID: 27385206 DOI: 10.1021/jacs.6b05428

Abstact

Cupredoxins are electron-transfer proteins that have active sites containing a mononuclear Cu center with an unusual trigonal monopyramidal structure (Type 1 Cu). A single Cu-Scys bond is present within the trigonal plane that is responsible for its unique physical properties. We demonstrate that a cysteine-containing variant of streptavidin (Sav) can serve as a protein host to model the structure and properties of Type 1 Cu sites. A series of artificial Cu proteins are described that rely on Sav and a series of biotinylated synthetic Cu complexes. Optical and EPR measurements highlight the presence of a Cu-Scys bond, and XRD analysis provides structural evidence. We further provide evidence that changes in the linker between the biotin and Cu complex within the synthetic constructs allows for small changes in the placement of Cu centers within Sav that have dramatic effects on the structural and physical properties of the resulting artificial metalloproteins. These findings highlight the utility of the biotin-Sav technology as an approach for simulating active sites of metalloproteins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures