5L25 image
Deposition Date 2016-07-31
Release Date 2016-09-14
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5L25
Title:
Crystal Structure of Arabidopsis thaliana Bor1
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
4.11 Å
R-Value Free:
0.39
R-Value Work:
0.35
R-Value Observed:
0.36
Space Group:
P 42 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Boron transporter 1
Gene (Uniprot):BOR1
Chain IDs:A
Chain Length:652
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
Structure of Bor1 supports an elevator transport mechanism for SLC4 anion exchangers.
Proc.Natl.Acad.Sci.USA 113 10542 10546 (2016)
PMID: 27601653 DOI: 10.1073/pnas.1612603113

Abstact

Boron is essential for plant growth because of its incorporation into plant cell walls; however, in excess it is toxic to plants. Boron transport and homeostasis in plants is regulated in part by the borate efflux transporter Bor1, a member of the solute carrier (SLC) 4 transporter family with homology to the human bicarbonate transporter Band 3. Here, we present the 4.1-Å resolution crystal structure of Arabidopsis thaliana Bor1. The structure displays a dimeric architecture in which dimerization is mediated by centralized Gate domains. Comparisons with a structure of Band 3 in an outward-open state reveal that the Core domains of Bor1 have rotated inwards to achieve an occluded state. Further structural comparisons with UapA, a xanthine transporter from the nucleobase-ascorbate transporter family, show that the downward pivoting of the Core domains relative to the Gate domains may access an inward-open state. These results suggest that the SLC4, SLC26, and nucleobase-ascorbate transporter families all share an elevator transport mechanism in which alternating access is provided by Core domains that carry substrates across a membrane.

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