5L22 image
Deposition Date 2016-07-30
Release Date 2017-03-08
Last Version Date 2024-03-06
Entry Detail
PDB ID:
5L22
Title:
PrtD T1SS ABC transporter
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.15 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ABC transporter (HlyB subfamily)
Gene (Uniprot):abcT5
Chain IDs:A (auth: B), B (auth: A)
Chain Length:572
Number of Molecules:2
Biological Source:Aquifex aeolicus (strain VF5)
Primary Citation
Structure of a Type-1 Secretion System ABC Transporter.
Structure 25 522 529 (2017)
PMID: 28216041 DOI: 10.1016/j.str.2017.01.010

Abstact

Type-1 secretion systems (T1SSs) represent a widespread mode of protein secretion across the cell envelope in Gram-negative bacteria. The T1SS is composed of an inner-membrane ABC transporter, a periplasmic membrane-fusion protein, and an outer-membrane porin. These three components assemble into a complex spanning both membranes and providing a conduit for the translocation of unfolded polypeptides. We show that ATP hydrolysis and assembly of the entire T1SS complex is necessary for protein secretion. Furthermore, we present a 3.15-Å crystal structure of AaPrtD, the ABC transporter found in the Aquifex aeolicus T1SS. The structure suggests a substrate entry window just above the transporter's nucleotide binding domains. In addition, highly kinked transmembrane helices, which frame a narrow channel not observed in canonical peptide transporters, are likely involved in substrate translocation. Overall, the AaPrtD structure supports a polypeptide transport mechanism distinct from alternating access.

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Primary Citation of related structures