5L15 image
Entry Detail
PDB ID:
5L15
Keywords:
Title:
The crystal structure of neuraminidase in complex with oseltamivir from A/Shanghai/2/2013 (H7N9) influenza virus
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-07-28
Release Date:
2017-08-09
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
I 4 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Neuraminidase
Chain IDs:A
Chain Length:397
Number of Molecules:1
Biological Source:Influenza A virus
Primary Citation
Drug Susceptibility Evaluation of an Influenza A(H7N9) Virus by Analyzing Recombinant Neuraminidase Proteins.
J. Infect. Dis. 216 S566 S574 (2017)
PMID: 28934455 DOI: 10.1093/infdis/jiw625

Abstact

BACKGROUND Neuraminidase (NA) inhibitors are the recommended antiviral medications for influenza treatment. However, their therapeutic efficacy can be compromised by NA changes that emerge naturally and/or following antiviral treatment. Knowledge of which molecular changes confer drug resistance of influenza A(H7N9) viruses (group 2NA) remains sparse. METHODS Fourteen amino acid substitutions were introduced into the NA of A/Shanghai/2/2013(H7N9). Recombinant N9 (recN9) proteins were expressed in a baculovirus system in insect cells and tested using the Centers for Disease Control and Prevention standardized NA inhibition (NI) assay with oseltamivir, zanamivir, peramivir, and laninamivir. The wild-type N9 crystal structure was determined in complex with oseltamivir, zanamivir, or sialic acid, and structural analysis was performed. RESULTS All substitutions conferred either reduced or highly reduced inhibition by at least 1 NA inhibitor; half of them caused reduced inhibition or highly reduced inhibition by all NA inhibitors. R292K conferred the highest increase in oseltamivir half-maximal inhibitory concentration (IC50), and E119D conferred the highest zanamivir IC50. Unlike N2 (another group 2NA), H274Y conferred highly reduced inhibition by oseltamivir. Additionally, R152K, a naturally occurring variation at the NA catalytic residue of A(H7N9) viruses, conferred reduced inhibition by laninamivir. CONCLUSIONS The recNA method is a valuable tool for assessing the effect of NA changes on drug susceptibility of emerging influenza viruses.

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