5L0Y image
Deposition Date 2016-07-28
Release Date 2017-03-22
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5L0Y
Title:
Crystal Structure of a Sec72-ssa1 c-terminal peptide fusion protein
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.87 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Sec72-ssa1 c-terminal peptide fusion protein
Gene (Uniprot):CTHT_0068610
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:159
Number of Molecules:8
Biological Source:Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719), Saccharomyces cerevisiae S288c
Polymer Type:polypeptide(L)
Molecule:PRO-THR-VAL-GLU-GLU-VAL-ASP
Chain IDs:I, J, K, L, M
Chain Length:7
Number of Molecules:5
Biological Source:Chaetomium thermophilum
Ligand Molecules
Primary Citation
Two alternative binding mechanisms connect the protein translocation Sec71-Sec72 complex with heat shock proteins.
J. Biol. Chem. 292 8007 8018 (2017)
PMID: 28286332 DOI: 10.1074/jbc.M116.761122

Abstact

The biosynthesis of many eukaryotic proteins requires accurate targeting to and translocation across the endoplasmic reticulum membrane. Post-translational protein translocation in yeast requires both the Sec61 translocation channel, and a complex of four additional proteins: Sec63, Sec62, Sec71, and Sec72. The structure and function of these proteins are largely unknown. This pathway also requires the cytosolic Hsp70 protein Ssa1, but whether Ssa1 associates with the translocation machinery to target protein substrates to the membrane is unclear. Here, we use a combined structural and biochemical approach to explore the role of Sec71-Sec72 subcomplex in post-translational protein translocation. To this end, we report a crystal structure of the Sec71-Sec72 complex, which revealed that Sec72 contains a tetratricopeptide repeat (TPR) domain that is anchored to the endoplasmic reticulum membrane by Sec71. We also determined the crystal structure of this TPR domain with a C-terminal peptide derived from Ssa1, which suggests how Sec72 interacts with full-length Ssa1. Surprisingly, Ssb1, a cytoplasmic Hsp70 that binds ribosome-associated nascent polypeptide chains, also binds to the TPR domain of Sec72, even though it lacks the TPR-binding C-terminal residues of Ssa1. We demonstrate that Ssb1 binds through its ATPase domain to the TPR domain, an interaction that leads to inhibition of nucleotide exchange. Taken together, our results suggest that translocation substrates can be recruited to the Sec71-Sec72 complex either post-translationally through Ssa1 or co-translationally through Ssb1.

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Primary Citation of related structures