5KZF image
Deposition Date 2016-07-25
Release Date 2017-05-17
Last Version Date 2024-03-06
Entry Detail
PDB ID:
5KZF
Keywords:
Title:
Crystal structure of near full-length hexameric Mycobacterium tuberculosis proteasomal ATPase Mpa in apo form
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.49 Å
R-Value Free:
0.30
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome-associated ATPase
Gene (Uniprot):mpa
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:513
Number of Molecules:12
Biological Source:Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
Ligand Molecules
Primary Citation
Mycobacterium tuberculosis proteasomal ATPase Mpa has a beta-grasp domain that hinders docking with the proteasome core protease.
Mol. Microbiol. 105 227 241 (2017)
PMID: 28419599 DOI: 10.1111/mmi.13695

Abstact

Mycobacterium tuberculosis (Mtb) has a proteasome system that is essential for its ability to cause lethal infections in mice. A key component of the system is the proteasomal adenosine triphosphatase (ATPase) Mpa, which captures, unfolds, and translocates protein substrates into the Mtb proteasome core particle for degradation. Here, we report the crystal structures of near full-length hexameric Mtb Mpa in apo and ADP-bound forms. Surprisingly, the structures revealed a ubiquitin-like β-grasp domain that precedes the proteasome-activating carboxyl terminus. This domain, which was only found in bacterial proteasomal ATPases, buries the carboxyl terminus of each protomer in the central channel of the hexamer and hinders the interaction of Mpa with the proteasome core protease. Thus, our work reveals the structure of a bacterial proteasomal ATPase in the hexameric form, and the structure finally explains why Mpa is unable to stimulate robust protein degradation in vitro in the absence of other, yet-to-be-identified co-factors.

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Primary Citation of related structures