5K8Q image
Deposition Date 2016-05-30
Release Date 2016-08-24
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5K8Q
Title:
Crystal Structure of Calcium-loaded Calmodulin in complex with STRA6 CaMBP2-site peptide.
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Danio rerio (Taxon ID: 7955)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.74 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Calmodulin
Chain IDs:A
Chain Length:149
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Zgc:136689
Chain IDs:B
Chain Length:29
Number of Molecules:1
Biological Source:Danio rerio
Primary Citation

Abstact

Vitamin A homeostasis is critical to normal cellular function. Retinol-binding protein (RBP) is the sole specific carrier in the bloodstream for hydrophobic retinol, the main form in which vitamin A is transported. The integral membrane receptor STRA6 mediates cellular uptake of vitamin A by recognizing RBP-retinol to trigger release and internalization of retinol. We present the structure of zebrafish STRA6 determined to 3.9-angstrom resolution by single-particle cryo-electron microscopy. STRA6 has one intramembrane and nine transmembrane helices in an intricate dimeric assembly. Unexpectedly, calmodulin is bound tightly to STRA6 in a noncanonical arrangement. Residues involved with RBP binding map to an archlike structure that covers a deep lipophilic cleft. This cleft is open to the membrane, suggesting a possible mode for internalization of retinol through direct diffusion into the lipid bilayer.

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Primary Citation of related structures