5K8K image
Deposition Date 2016-05-30
Release Date 2016-08-10
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5K8K
Keywords:
Title:
Structure of the Haemophilus influenzae LpxH-lipid X complex
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
H 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:UDP-2,3-diacylglucosamine hydrolase
Gene (Uniprot):lpxH
Chain IDs:A
Chain Length:256
Number of Molecules:1
Biological Source:Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Structure of the essential Haemophilus influenzae UDP-diacylglucosamine pyrophosphohydrolase LpxH in lipid A biosynthesis.
Nat Microbiol 1 16154 16154 (2016)
PMID: 27780190 DOI: 10.1038/nmicrobiol.2016.154

Abstact

In most Gram-negative pathogens, the hydrolysis of UDP-2,3-diacylglucosamine to generate lipid X in lipid A biosynthesis is catalysed by the membrane-associated enzyme LpxH. We report the crystal structure of LpxH in complex with its product, lipid X, unveiling a unique insertion lid above the conserved architecture of calcineurin-like phosphoesterases. This structure reveals elaborate interactions surrounding lipid X and provides molecular insights into the substrate selectivity, catalysis and inhibition of LpxH.

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Disease

Primary Citation of related structures