5K86 image
Deposition Date 2016-05-27
Release Date 2017-06-28
Last Version Date 2023-11-15
Entry Detail
PDB ID:
5K86
Title:
Aza-glycine containing collagen peptide
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.13 Å
R-Value Free:
0.15
R-Value Work:
0.12
R-Value Observed:
0.13
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aza-glycine containing collagen peptide
Chain IDs:A, B, C
Chain Length:25
Number of Molecules:3
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Structural Basis for Aza-Glycine Stabilization of Collagen.
J. Am. Chem. Soc. 139 9427 9430 (2017)
PMID: 28650147 DOI: 10.1021/jacs.7b03398

Abstact

Previously, we have demonstrated that replacement of the strictly conserved glycine in collagen with aza-glycine provides a general solution for stabilizing triple helical collagen peptides (Chenoweth, D. M.; et al. J. Am. Chem. Soc. 2016, 138, 9751 ; 2015, 137, 12422). The additional hydrogen bond and conformational constraints provided by aza-glycine increases the thermal stability and rate of folding in collagen peptides composed of Pro-Hyp-Gly triplet repeats, allowing for truncation to the smallest self-assembling peptide systems observed to date. Here we show that aza-glycine substitution enhances the stability of an arginine-containing collagen peptide and provide a structural basis for this stabilization with an atomic resolution crystal structure. These results demonstrate that a single nitrogen atom substitution for a glycine alpha-carbon increases the peptide's triple helix melting temperature by 8.6 °C. Furthermore, we provide the first structural basis for stabilization of triple helical collagen peptides containing aza-glycine and we demonstrate that minimal alteration to the peptide backbone conformation occurs with aza-glycine incorporation.

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Primary Citation of related structures