ISDA

Entry Detail

PDB ID:

5K78

Keywords:

HYDROLASE/RNA

Title:

Dbr1 in complex with 16-mer branched RNA

Biological Source:

Source Organism:

Entamoeba histolytica, Saccharomyces cerevisiae

Host Organism:

Escherichia coli

PDB Version:

Deposition Date:

2016-05-25

Release Date:

2016-12-07

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.64 Å

R-Value Free:

0.24

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:RNA lariat debranching enzyme, putative
Chain IDs:A, B, C, D, E
Chain Length:360
Number of Molecules:5
Biological Source:Entamoeba histolytica

UniProt ID:C4M1P9 Pfam ID:PF00149, PF20890

Polymer Type:polyribonucleotide
Description:branch 1 of branched RNA 5'-UACUAA(2'-GUAUGU)CAAGU-3'
Chain IDs:F (auth: X), H (auth: Y)
Chain Length:6
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

Polymer Type:polyribonucleotide
Description:branch 2 of branched RNA 5'-UACUAA(2'-GUAUGU)CAAGU-3'
Chain IDs:G (auth: x), I (auth: y)
Chain Length:6
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

Ligand Molecules