5K6H image
Entry Detail
PDB ID:
5K6H
Keywords:
Title:
Crystal structure of prefusion-stabilized RSV F single-chain 9-10 DS-Cav1 A149C-Y458C variant.
Biological Source:
PDB Version:
Deposition Date:
2016-05-24
Release Date:
2016-09-21
Method Details:
Experimental Method:
Resolution:
2.65 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 41 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fusion glycoprotein F0
Chain IDs:A (auth: F)
Chain Length:445
Number of Molecules:1
Biological Source:Human respiratory syncytial virus A (strain A2)
Primary Citation
Iterative structure-based improvement of a fusion-glycoprotein vaccine against RSV.
Nat.Struct.Mol.Biol. 23 811 820 (2016)
PMID: 27478931 DOI: 10.1038/nsmb.3267

Abstact

Structure-based design of vaccines, particularly the iterative optimization used so successfully in the structure-based design of drugs, has been a long-sought goal. We previously developed a first-generation vaccine antigen called DS-Cav1, comprising a prefusion-stabilized form of the fusion (F) glycoprotein, which elicits high-titer protective responses against respiratory syncytial virus (RSV) in mice and macaques. Here we report the improvement of DS-Cav1 through iterative cycles of structure-based design that significantly increased the titer of RSV-protective responses. The resultant second-generation 'DS2'-stabilized immunogens have their F subunits genetically linked, their fusion peptides deleted and their interprotomer movements stabilized by an additional disulfide bond. These DS2 immunogens are promising vaccine candidates with superior attributes, such as their lack of a requirement for furin cleavage and their increased antigenic stability against heat inactivation. The iterative structure-based improvement described here may have utility in the optimization of other vaccine antigens.

Legend

Protein

Chemical

Disease

Primary Citation of related structures