5K5R image
Entry Detail
PDB ID:
5K5R
Title:
AspA-32mer DNA,crystal form 2
Biological Source:
PDB Version:
Deposition Date:
2016-05-23
Release Date:
2016-06-15
Method Details:
Experimental Method:
Resolution:
3.09 Å
R-Value Free:
0.27
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:AspA
Chain IDs:A (auth: C), B (auth: D), C (auth: A), D (auth: B), G (auth: E), H (auth: F)
Chain Length:98
Number of Molecules:6
Biological Source:Sulfolobus sp. NOB8H2
Polymer Type:polydeoxyribonucleotide
Description:DNA (32-MER)
Chain IDs:F (auth: N)
Chain Length:32
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Description:DNA (32-MER)
Chain IDs:E (auth: P)
Chain Length:32
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science 349 1120 1124 (2015)
PMID: 26339031 DOI: 10.1126/science.aaa9046

Abstact

Although recent studies have provided a wealth of information about archaeal biology, nothing is known about the molecular basis of DNA segregation in these organisms. Here, we unveil the machinery and assembly mechanism of the archaeal Sulfolobus pNOB8 partition system. This system uses three proteins: ParA; an atypical ParB adaptor; and a centromere-binding component, AspA. AspA utilizes a spreading mechanism to create a DNA superhelix onto which ParB assembles. This supercomplex links to the ParA motor, which contains a bacteria-like Walker motif. The C domain of ParB harbors structural similarity to CenpA, which dictates eukaryotic segregation. Thus, this archaeal system combines bacteria-like and eukarya-like components, which suggests the possible conservation of DNA segregation principles across the three domains of life.

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Primary Citation of related structures