5K5D image
Entry Detail
PDB ID:
5K5D
Keywords:
Title:
Structure of the C2221 form of Pnob8-like ParB-N domain
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-05-23
Release Date:
2016-06-15
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ParB domain protein nuclease
Chain IDs:A (auth: B), B (auth: A), C
Chain Length:300
Number of Molecules:3
Biological Source:Sulfolobus solfataricus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science 349 1120 1124 (2015)
PMID: 26339031 DOI: 10.1126/science.aaa9046

Abstact

Although recent studies have provided a wealth of information about archaeal biology, nothing is known about the molecular basis of DNA segregation in these organisms. Here, we unveil the machinery and assembly mechanism of the archaeal Sulfolobus pNOB8 partition system. This system uses three proteins: ParA; an atypical ParB adaptor; and a centromere-binding component, AspA. AspA utilizes a spreading mechanism to create a DNA superhelix onto which ParB assembles. This supercomplex links to the ParA motor, which contains a bacteria-like Walker motif. The C domain of ParB harbors structural similarity to CenpA, which dictates eukaryotic segregation. Thus, this archaeal system combines bacteria-like and eukarya-like components, which suggests the possible conservation of DNA segregation principles across the three domains of life.

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Primary Citation of related structures