5K39 image
Deposition Date 2016-05-19
Release Date 2017-03-29
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5K39
Title:
THE TYPE II COHESIN DOCKERIN COMPLEX FROM CLOSTRIDIUM THERMOCELLUM
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.98 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cellulosome anchoring protein cohesin region
Chain IDs:A
Chain Length:171
Number of Molecules:1
Biological Source:Ruminiclostridium thermocellum 27405
Polymer Type:polypeptide(L)
Molecule:Dockerin module from a protein of unknown function
Gene (Uniprot):Cthe_1806
Chain IDs:B
Chain Length:164
Number of Molecules:1
Biological Source:Clostridium thermocellum 27405
Ligand Molecules
Primary Citation
Diverse specificity of cellulosome attachment to the bacterial cell surface.
Sci Rep 6 38292 38292 (2016)
PMID: 27924829 DOI: 10.1038/srep38292

Abstact

During the course of evolution, the cellulosome, one of Nature's most intricate multi-enzyme complexes, has been continuously fine-tuned to efficiently deconstruct recalcitrant carbohydrates. To facilitate the uptake of released sugars, anaerobic bacteria use highly ordered protein-protein interactions to recruit these nanomachines to the cell surface. Dockerin modules located within a non-catalytic macromolecular scaffold, whose primary role is to assemble cellulosomal enzymatic subunits, bind cohesin modules of cell envelope proteins, thereby anchoring the cellulosome onto the bacterial cell. Here we have elucidated the unique molecular mechanisms used by anaerobic bacteria for cellulosome cellular attachment. The structure and biochemical analysis of five cohesin-dockerin complexes revealed that cell surface dockerins contain two cohesin-binding interfaces, which can present different or identical specificities. In contrast to the current static model, we propose that dockerins utilize multivalent modes of cohesin recognition to recruit cellulosomes to the cell surface, a mechanism that maximises substrate access while facilitating complex assembly.

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Primary Citation of related structures