5JYG image
Deposition Date 2016-05-13
Release Date 2016-07-27
Last Version Date 2024-03-06
Entry Detail
PDB ID:
5JYG
Title:
Cryo-EM structure of the MamK filament at 6.5 A
Biological Source:
Method Details:
Experimental Method:
Resolution:
6.50 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Actin-like ATPase
Gene (Uniprot):mamK
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N
Chain Length:347
Number of Molecules:14
Biological Source:Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Primary Citation
Structure of the magnetosome-associated actin-like MamK filament at subnanometer resolution.
Protein Sci. 26 93 102 (2017)
PMID: 27391173 DOI: 10.1002/pro.2979

Abstact

Magnetotactic bacteria possess cellular compartments called magnetosomes that sense magnetic fields. Alignment of magnetosomes in the bacterial cell is necessary for their function, and this is achieved through anchoring of magnetosomes to filaments composed of the protein MamK. MamK is an actin homolog that polymerizes upon ATP binding. Here, we report the structure of the MamK filament at ∼6.5 Å, obtained by cryo-Electron Microscopy. This structure confirms our previously reported double-stranded, nonstaggered architecture, and reveals the molecular basis for filament formation. While MamK is closest in sequence to the bacterial actin MreB, the longitudinal contacts along each MamK strand most closely resemble those of eukaryotic actin. In contrast, the cross-strand interface, with a surprisingly limited set of contacts, is novel among actin homologs and gives rise to the nonstaggered architecture.

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