ISDA: 5JXM

Deposition Date 2016-05-13

Release Date 2016-06-08

Last Version Date 2023-09-27

Entry Detail

PDB ID:

5JXM

Keywords:

TRANSFERASE

Title:

Crystal Structure of Prenyltransferase PriB Apo Form

Biological Source:

Source Organism:

Streptomyces sp. RM-5-8 (Taxon ID: 1429103)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.15 Å

R-Value Free:

0.21

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

C 1 2 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:PriB
Chain IDs:A
Chain Length:405
Number of Molecules:1
Biological Source:Streptomyces sp. RM-5-8

UniProt ID:A0A182DWE5 Pfam ID:PF11991

Ligand Molecules

TRS

Primary Citation

Structure and specificity of a permissive bacterial C-prenyltransferase.

Elshahawi, S.I, Cao, H, Shaaban, K.A, Ponomareva, L.V, Subramanian, T, Farman, M.L, Spielmann, H.P, Phillips, G.N, Thorson, J.S, Singh, S.Show

Nat. Chem. Biol. 13 366 368 (2017)

PMID: 28166207 DOI: 10.1038/nchembio.2285

Abstact

This study highlights the biochemical and structural characterization of the L-tryptophan C6 C-prenyltransferase (C-PT) PriB from Streptomyces sp. RM-5-8. PriB was found to be uniquely permissive to a diverse array of prenyl donors and acceptors including daptomycin. Two additional PTs also produced novel prenylated daptomycins with improved antibacterial activities over the parent drug.

Legend

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Chemical

Disease

Primary Citation of related structures