5JR6 image
Deposition Date 2016-05-05
Release Date 2016-08-31
Last Version Date 2023-11-15
Entry Detail
PDB ID:
5JR6
Keywords:
Title:
The Xray Crystal Structure of P. falciparum Aminopeptidase P in Complex With Apstatin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Peptidase, putative
Chain IDs:A, B
Chain Length:664
Number of Molecules:2
Biological Source:Plasmodium falciparum (isolate 3D7)
Polymer Type:polypeptide(L)
Molecule:Apstatin
Chain IDs:C (auth: F)
Chain Length:5
Number of Molecules:1
Biological Source:synthetic construct
Peptide-like Molecules
PRD_000553
Primary Citation
Structure and substrate fingerprint of aminopeptidase P from Plasmodium falciparum.
Biochem.J. 473 3189 3204 (2016)
PMID: 27462122 DOI: 10.1042/BCJ20160550

Abstact

Malaria is one of the world's most prevalent parasitic diseases, with over 200 million cases annually. Alarmingly, the spread of drug-resistant parasites threatens the effectiveness of current antimalarials and has made the development of novel therapeutic strategies a global health priority. Malaria parasites have a complicated lifecycle, involving an asymptomatic 'liver stage' and a symptomatic 'blood stage'. During the blood stage, the parasites utilise a proteolytic cascade to digest host hemoglobin, which produces free amino acids absolutely necessary for parasite growth and reproduction. The enzymes required for hemoglobin digestion are therefore attractive therapeutic targets. The final step of the cascade is catalyzed by several metalloaminopeptidases, including aminopeptidase P (APP). We developed a novel platform to examine the substrate fingerprint of APP from Plasmodium falciparum (PfAPP) and to show that it can catalyze the removal of any residue immediately prior to a proline. Further, we have determined the crystal structure of PfAPP and present the first examination of the 3D structure of this essential malarial enzyme. Together, these analyses provide insights into potential mechanisms of inhibition that could be used to develop novel antimalarial therapeutics.

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Primary Citation of related structures