5JQV image
Deposition Date 2016-05-05
Release Date 2016-09-28
Last Version Date 2023-09-27
Entry Detail
PDB ID:
5JQV
Keywords:
Title:
Crystal structure of Cytochrome P450 BM3 heme domain T269V/L272W/L322I/A406S (WIVS) variant with iron(III) deuteroporphyrin IX bound
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.34 Å
R-Value Free:
0.28
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bifunctional cytochrome P450/NADPH--P450 reductase
Gene (Uniprot):cyp102A1
Mutations:T269V,L272W,L322I,A406S
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:471
Number of Molecules:8
Biological Source:Bacillus megaterium (strain ATCC 14581 / DSM 32 / JCM 2506 / NBRC 15308 / NCIMB 9376 / NCTC 10342 / VKM B-512)
Ligand Molecules
Primary Citation
An Evolved Orthogonal Enzyme/Cofactor Pair.
J.Am.Chem.Soc. 138 12451 12458 (2016)
PMID: 27575374 DOI: 10.1021/jacs.6b05847

Abstact

We introduce a strategy that expands the functionality of hemoproteins through orthogonal enzyme/heme pairs. By exploiting the ability of a natural heme transport protein, ChuA, to promiscuously import heme derivatives, we have evolved a cytochrome P450 (P450BM3) that selectively incorporates a nonproteinogenic cofactor, iron deuteroporphyrin IX (Fe-DPIX), even in the presence of endogenous heme. Crystal structures show that selectivity gains are due to mutations that introduce steric clash with the heme vinyl groups while providing a complementary binding surface for the smaller Fe-DPIX cofactor. Furthermore, the evolved orthogonal enzyme/cofactor pair is active in non-natural carbenoid-mediated olefin cyclopropanation. This methodology for the generation of orthogonal enzyme/cofactor pairs promises to expand cofactor diversity in artificial metalloenzymes.

Legend

Protein

Chemical

Disease

Primary Citation of related structures