ISDA

Deposition Date 2016-04-25

Release Date 2016-05-04

Last Version Date 2024-03-20

Entry Detail

PDB ID:

5JJU

Keywords:

HYDROLASE/RNA

Title:

Crystal structure of Rv2837c complexed with 5'-pApA and 5'-AMP

Biological Source:

Source Organism:

Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (Taxon ID: 419947)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.31 Å

R-Value Free:

0.28

R-Value Work:

0.21

R-Value Observed:

0.22

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein Rv2837c
Gene (Uniprot):MRA_2860
Chain IDs:A, B
Chain Length:340
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)

UniProt ID:A5U6I9 Pfam ID:PF01368, PF02272

Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(P*AP*A)-3')
Chain IDs:C
Chain Length:2
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

AMP

Primary Citation

Structural and biochemical insight into the mechanism of Rv2837c from Mycobacterium tuberculosis as a c-di-NMP phosphodiesterase

He, Q, Wang, F, Liu, S, Zhu, D, Cong, H, Gao, F, Li, B, Wang, H, Lin, Z, Liao, J, Gu, L, He, Q, Wang, F, Liu, S, Zhu, D, Cong, H, Gao, F, Li, B, Wang, H, Lin, Z, Liao, J, Gu, L.Show

J.Biol.Chem. 291 14386 14387 (2016)

PMID: 27371563 DOI: 10.1074/jbc.A115.699801

Primary Citation of related structures