5IXQ image
Entry Detail
PDB ID:
5IXQ
Title:
Crystal structure of the Arabidopsis receptor kinase HAESA LRR ectdomain in complex with the peptide hormone IDA.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-03-23
Release Date:
2016-04-20
Method Details:
Experimental Method:
Resolution:
1.86 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Receptor-like protein kinase 5
Chain IDs:A
Chain Length:616
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:Protein IDA
Chain IDs:B
Chain Length:12
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
HYP B PRO modified residue
Primary Citation
Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife 5 ? ? (2016)
PMID: 27058169 DOI: 10.7554/eLife.15075

Abstact

Plants constantly renew during their life cycle and thus require to shed senescent and damaged organs. Floral abscission is controlled by the leucine-rich repeat receptor kinase (LRR-RK) HAESA and the peptide hormone IDA. It is unknown how expression of IDA in the abscission zone leads to HAESA activation. Here we show that IDA is sensed directly by the HAESA ectodomain. Crystal structures of HAESA in complex with IDA reveal a hormone binding pocket that accommodates an active dodecamer peptide. A central hydroxyproline residue anchors IDA to the receptor. The HAESA co-receptor SERK1, a positive regulator of the floral abscission pathway, allows for high-affinity sensing of the peptide hormone by binding to an Arg-His-Asn motif in IDA. This sequence pattern is conserved among diverse plant peptides, suggesting that plant peptide hormone receptors may share a common ligand binding mode and activation mechanism.

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Primary Citation of related structures