5IVX image
Entry Detail
PDB ID:
5IVX
Keywords:
Title:
Crystal Structure of B4.2.3 T-Cell Receptor and H2-Dd P18-I10 Complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-03-21
Release Date:
2017-03-29
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:H-2 class I histocompatibility antigen, D-D alpha chain
Chain IDs:A
Chain Length:277
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Beta-2-microglobulin
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:T-CELL RECEPTOR ALPHA CHAIN
Mutations:T163C
Chain IDs:C (auth: E)
Chain Length:194
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:T-CELL RECEPTOR BETA CHAIN
Mutations:F167C, C181A
Chain IDs:D (auth: F)
Chain Length:234
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:P18-I10
Chain IDs:E (auth: P)
Chain Length:10
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
An allosteric site in the T-cell receptor C beta domain plays a critical signalling role.
Nat Commun 8 15260 15260 (2017)
PMID: 28508865 DOI: 10.1038/ncomms15260

Abstact

The molecular mechanism through which the interaction of a clonotypic αβ T-cell receptor (TCR) with a peptide-loaded major histocompatibility complex (p/MHC) leads to T-cell activation is not yet fully understood. Here we exploit a high-affinity TCR (B4.2.3) to examine the structural changes that accompany binding to its p/MHC ligand (P18-I10/H2-Dd). In addition to conformational changes in complementarity-determining regions (CDRs) of the TCR seen in comparison of unliganded and bound X-ray structures, NMR characterization of the TCR β-chain dynamics reveals significant chemical shift effects in sites removed from the MHC-binding site. Remodelling of electrostatic interactions near the Cβ H3 helix at the membrane-proximal face of the TCR, a region implicated in interactions with the CD3 co-receptor, suggests a possible role for an allosteric mechanism in TCR signalling. The contribution of these TCR residues to signal transduction is supported by mutagenesis and T-cell functional assays.

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Primary Citation of related structures