5IV7 image
Deposition Date 2016-03-19
Release Date 2016-05-18
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5IV7
Keywords:
Title:
Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
6.77 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp6
Gene (Uniprot):6
Chain IDs:A, B, Q, R, GA (auth: g), HA (auth: h), WA (auth: w), XA (auth: x), MB (auth: BF), NB (auth: BG), CC (auth: EA), DC (auth: EB)
Chain Length:660
Number of Molecules:12
Biological Source:Enterobacteria phage T4
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp7
Gene (Uniprot):7
Chain IDs:C, S, IA (auth: i), YA (auth: y), OB (auth: CA), EC
Chain Length:219
Number of Molecules:6
Biological Source:Enterobacteria phage T4
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp8
Gene (Uniprot):8
Chain IDs:D, E, T, U, JA (auth: j), KA (auth: k), ZA (auth: z), AB (auth: AA), PB (auth: CB), QB (auth: CC), FC (auth: ED), GC (auth: EE)
Chain Length:334
Number of Molecules:12
Biological Source:Enterobacteria phage T4
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp9
Gene (Uniprot):9
Chain IDs:F, G, H, V, W, X, LA (auth: l), MA (auth: m), NA (auth: n), BB (auth: AB), CB (auth: AC), DB (auth: AD), RB (auth: CD), SB (auth: CE), TB (auth: CF), HC (auth: EF), IC (auth: EG), JC (auth: FA)
Chain Length:288
Number of Molecules:18
Biological Source:Enterobacteria phage T4
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp10
Gene (Uniprot):10
Chain IDs:I, J, K, Y, Z, AA (auth: a), OA (auth: o), PA (auth: p), QA (auth: q), EB (auth: AE), FB (auth: AF), GB (auth: AG), UB (auth: CG), VB (auth: DA), WB (auth: DB), KC (auth: FB), LC (auth: FC), MC (auth: FD)
Chain Length:660
Number of Molecules:18
Biological Source:Enterobacteria phage T4
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp11
Gene (Uniprot):11
Chain IDs:L, M, N, BA (auth: b), CA (auth: c), DA (auth: d), RA (auth: r), SA (auth: s), TA (auth: t), HB (auth: BA), IB (auth: BB), JB (auth: BC), XB (auth: DC), YB (auth: DD), ZB (auth: DE), NC (auth: FE), OC (auth: FF), PC (auth: FG)
Chain Length:219
Number of Molecules:18
Biological Source:Enterobacteria phage T4
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp25
Gene (Uniprot):25
Chain IDs:O, EA (auth: e), UA (auth: u), KB (auth: BD), AC (auth: DF), QC (auth: GA)
Chain Length:132
Number of Molecules:6
Biological Source:Enterobacteria phage T4
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Baseplate wedge protein gp53
Gene (Uniprot):53
Chain IDs:P, FA (auth: f), VA (auth: v), LB (auth: BE), BC (auth: DG), RC (auth: GB)
Chain Length:196
Number of Molecules:6
Biological Source:Enterobacteria phage T4
Ligand Molecules
Primary Citation
Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature 533 346 352 (2016)
PMID: 27193680 DOI: 10.1038/nature17971

Abstact

Several systems, including contractile tail bacteriophages, the type VI secretion system and R-type pyocins, use a multiprotein tubular apparatus to attach to and penetrate host cell membranes. This macromolecular machine resembles a stretched, coiled spring (or sheath) wound around a rigid tube with a spike-shaped protein at its tip. A baseplate structure, which is arguably the most complex part of this assembly, relays the contraction signal to the sheath. Here we present the atomic structure of the approximately 6-megadalton bacteriophage T4 baseplate in its pre- and post-host attachment states and explain the events that lead to sheath contraction in atomic detail. We establish the identity and function of a minimal set of components that is conserved in all contractile injection systems and show that the triggering mechanism is universally conserved.

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Disease

Primary Citation of related structures