5IT5 image
Deposition Date 2016-03-16
Release Date 2016-10-19
Last Version Date 2023-09-27
Entry Detail
PDB ID:
5IT5
Title:
Thermus thermophilus PilB core ATPase region
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.65 Å
R-Value Free:
0.27
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 2 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP binding motif-containing protein PilF
Chain IDs:A (auth: F), B (auth: A), C (auth: B), D (auth: E), E (auth: C), F (auth: D)
Chain Length:385
Number of Molecules:6
Biological Source:Thermus thermophilus
Primary Citation
Crystal Structure of a Type IV Pilus Assembly ATPase: Insights into the Molecular Mechanism of PilB from Thermus thermophilus.
Structure 24 1886 1897 (2016)
PMID: 27667690 DOI: 10.1016/j.str.2016.08.010

Abstact

Type IV pili (T4P) mediate bacterial motility and virulence. The PilB/GspE family ATPases power the assembly of T4P and type 2 secretion systems. We determined the structure of the ATPase region of PilB (PilBATP) in complex with ATPγS to provide a model of a T4P assembly ATPase and a view of a PilB/GspE family hexamer at better than 3-Å resolution. Spatial positioning and conformations of the protomers suggest a mechanism of force generation. All six PilBATP protomers contain bound ATPγS. Two protomers form a closed conformation poised for ATP hydrolysis. The other four molecules assume an open conformation but separate into two pairs with distinct active-site accessibilities. We propose that one pair represents the post-hydrolysis phase while the other pair appears poised for ADP/ATP exchange. Collectively, the data suggest that T4P assembly is powered by coordinating concurrent substrate binding with ATP hydrolysis across the PilB hexamer.

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Primary Citation of related structures
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