ISDA

Deposition Date 2016-03-15

Release Date 2016-05-11

Last Version Date 2024-10-30

Entry Detail

PDB ID:

5ISM

Keywords:

Hydrolase/Hydrolase Inhibitor

Title:

Human DPP4 in complex with a novel 5,5,6-tricyclic pyrrolidine inhibitor

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.00 Å

R-Value Free:

0.20

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Dipeptidyl peptidase 4
Gene (Uniprot):DPP4
Mutations:S39T
Chain IDs:A, B
Chain Length:728
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P27487 Pfam ID:PF00930, PF00326 EC:3.4.14.5

Ligand Molecules

6DG

NAG

Primary Citation

The discovery of novel 5,6,5- and 5,5,6-tricyclic pyrrolidines as potent and selective DPP-4 inhibitors.

Cox, J.M, Chu, H.D, Kuethe, J.T, Gao, Y.D, Scapin, G, Eiermann, G, He, H, Li, X, Lyons, K.A, Metzger, J, Petrov, A, Wu, J.K, Xu, S, Sinha-Roy, R, Weber, A.E, Biftu, T.Show

Bioorg.Med.Chem.Lett. 26 2622 2626 (2016)

PMID: 27106708 DOI: 10.1016/j.bmcl.2016.04.020

Abstact

Novel potent and selective 5,6,5- and 5,5,6-tricyclic pyrrolidine dipeptidyl peptidase IV (DPP-4) inhibitors were identified. Structure-activity relationship (SAR) efforts focused on improving the intrinsic DPP-4 inhibition potency, increasing protease selectivity, and demonstrating clean ion channel and cytochrome P450 profiles while trying to achieve a pharmacokinetic profile suitable for once weekly dosing in humans.

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Protein

Chemical

Disease

Primary Citation of related structures