5IRO image
Entry Detail
PDB ID:
5IRO
Title:
Crystal structure of a complex between the Human adenovirus type 4 E3-19K protein and MHC class molecule HLA-A2/TAX
Biological Source:
PDB Version:
Deposition Date:
2016-03-14
Release Date:
2016-08-24
Method Details:
Experimental Method:
Resolution:
2.64 Å
R-Value Free:
0.28
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:HLA class I histocompatibility antigen, A-2 alpha chain
Chain IDs:A, E, I, M, Q, U
Chain Length:275
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:TAX protein
Chain IDs:B, F, J, N, R, V
Chain Length:9
Number of Molecules:6
Biological Source:Human T-lymphotropic virus 1
Polymer Type:polypeptide(L)
Description:Beta-2-microglobulin
Chain IDs:C, G, K, O, S, W
Chain Length:100
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:E3 19 kDa protein
Chain IDs:D, H, L, P, T, X
Chain Length:108
Number of Molecules:6
Biological Source:Human adenovirus E serotype 4
Primary Citation
Structure of the Adenovirus Type 4 (Species E) E3-19K/HLA-A2 Complex Reveals Species-Specific Features in MHC Class I Recognition.
J Immunol. 197 1399 1407 (2016)
PMID: 27385781 DOI: 10.4049/jimmunol.1600541

Abstact

Adenoviruses (Ads) subvert MHC class I Ag presentation and impair host anti-Ad cellular activities. Specifically, the Ad-encoded E3-19K immunomodulatory protein targets MHC class I molecules for retention within the endoplasmic reticulum of infected cells. We report the x-ray crystal structure of the Ad type 4 (Ad4) E3-19K of species E bound to HLA-A2 at 2.64-Å resolution. Structural analysis shows that Ad4 E3-19K adopts a tertiary fold that is shared only with Ad2 E3-19K of species C. A comparative analysis of the Ad4 E3-19K/HLA-A2 structure with our x-ray structure of Ad2 E3-19K/HLA-A2 identifies species-specific features in HLA-A2 recognition. Our analysis also reveals common binding characteristics that explain the promiscuous, and yet high-affinity, association of E3-19K proteins with HLA-A and HLA-B molecules. We also provide structural insights into why E3-19K proteins do not associate with HLA-C molecules. Overall, our study provides new information about how E3-19K proteins selectively engage with MHC class I to abrogate Ag presentation and counteract activation of CD8(+) T cells. The significance of MHC class I Ag presentation for controlling viral infections, as well as the threats of viral infections in immunocompromised patients, underline our efforts to characterize viral immunoevasins, such as E3-19K.

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