5II5 image
Entry Detail
PDB ID:
5II5
Keywords:
Title:
Crystal structure of red abalone VERL repeat 1 at 1.8 A resolution
Biological Source:
PDB Version:
Deposition Date:
2016-03-01
Release Date:
2017-06-14
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 65 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Maltose-binding periplasmic protein,Vitelline envelope sperm lysin receptor
Mutations:N4115Q, N4122T, N4142Y,N4115Q, N4122T, N4142Y,N4115Q, N4122T, N4142Y,N4115Q, N4122T, N4142Y
Chain IDs:A
Chain Length:496
Number of Molecules:1
Biological Source:Escherichia coli, Haliotis rufescens
Ligand Molecules
Peptide-like Molecules
PRD_900001
Primary Citation

Abstact

Recognition between sperm and the egg surface marks the beginning of life in all sexually reproducing organisms. This fundamental biological event depends on the species-specific interaction between rapidly evolving counterpart molecules on the gametes. We report biochemical, crystallographic, and mutational studies of domain repeats 1-3 of invertebrate egg coat protein VERL and their interaction with cognate sperm protein lysin. VERL repeats fold like the functionally essential N-terminal repeat of mammalian sperm receptor ZP2, whose structure is also described here. Whereas sequence-divergent repeat 1 does not bind lysin, repeat 3 binds it non-species specifically via a high-affinity, largely hydrophobic interface. Due to its intermediate binding affinity, repeat 2 selectively interacts with lysin from the same species. Exposure of a highly positively charged surface of VERL-bound lysin suggests that complex formation both disrupts the organization of egg coat filaments and triggers their electrostatic repulsion, thereby opening a hole for sperm penetration and fusion.

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