5HUQ image
Entry Detail
PDB ID:
5HUQ
Keywords:
Title:
A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-01-27
Release Date:
2016-02-10
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Lactate racemization operon protein LarA
Chain IDs:A, B
Chain Length:433
Number of Molecules:2
Biological Source:Lactobacillus plantarum
Primary Citation
METALLOPROTEINS. A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase.
Science 349 66 69 (2015)
PMID: 26138974 DOI: 10.1126/science.aab2272

Abstact

Lactic acid racemization is involved in lactate metabolism and cell wall assembly of many microorganisms. Lactate racemase (Lar) requires nickel, but the nickel-binding site and the role of three accessory proteins required for its activation remain enigmatic. We combined mass spectrometry and x-ray crystallography to show that Lar from Lactobacillus plantarum possesses an organometallic nickel-containing prosthetic group. A nicotinic acid mononucleotide derivative is tethered to Lys(184) and forms a tridentate pincer complex that coordinates nickel through one metal-carbon and two metal-sulfur bonds, with His(200) as another ligand. Although similar complexes have been previously synthesized, there was no prior evidence for the existence of pincer cofactors in enzymes. The wide distribution of the accessory proteins without Lar suggests that it may play a role in other enzymes.

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