5HSS image
Deposition Date 2016-01-26
Release Date 2016-04-27
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5HSS
Keywords:
Title:
Linalool dehydratase/isomerase: Ldi with monoterpene substrate
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Linalool dehydratase/isomerase
Gene (Uniprot):ldi
Chain IDs:A, B, C, D, E
Chain Length:371
Number of Molecules:5
Biological Source:Castellaniella defragrans
Primary Citation
X-ray structure of linalool dehydratase/isomerase from Castellaniella defragrans reveals enzymatic alkene synthesis.
Febs Lett. 590 1375 1383 (2016)
PMID: 27062179 DOI: 10.1002/1873-3468.12165

Abstact

Linalool dehydratase/isomerase (Ldi), an enzyme of terpene degradation in Castellaniella defragrans, isomerizes the primary monoterpene alcohol geraniol into the tertiary alcohol (S)-linalool and dehydrates (S)-linalool to the alkene β-myrcene. Here we report on the crystal structures of Ldi with and without terpene substrates, revealing a cofactor-free homopentameric enzyme. The substrates were embedded inside a hydrophobic channel between two monomers of the (α,α)6 barrel fold class and flanked by three clusters of polar residues involved in acid-base catalysis. The detailed view into the active site will guide future biotechnological applications of Ldi, in particular, for industrial butadiene and isoprene production from renewable sources.

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