ISDA: 5HR9

Deposition Date 2016-01-23

Release Date 2017-01-18

Last Version Date 2024-11-06

Entry Detail

PDB ID:

5HR9

Keywords:

TRANSFERASE/DNA

Title:

The crystal structure of Se-AsfvPolX(L52/163M mutant) in complex with 1nt-gap DNA1

Biological Source:

Source Organism:

African swine fever virus (Taxon ID: 10497)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.20 Å

R-Value Free:

0.25

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DNA polymerase beta-like protein
Mutagens:L52/163M
Chain IDs:A, B
Chain Length:178
Number of Molecules:2
Biological Source:African swine fever virus

UniProt ID:P42494 Pfam ID:PF01909, PF14791

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*GP*AP*CP*AP*AP*CP*GP*GP*GP*AP*CP*AP*AP*C)-3')
Chain IDs:C, F
Chain Length:15
Number of Molecules:2
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*TP*TP*GP*TP*CP*C)-3')
Chain IDs:D, E, G, H
Chain Length:7
Number of Molecules:4
Biological Source:synthetic construct

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
MSE	A	MET	modified residue

Primary Citation

The crystal structure of Se-AsfvPolX(L52/163M mutant) in complex with 1nt-gap DNA1

Chen, Y.Q, Zhang, J, Gan, J.H.Show

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