ISDA: 5HLL

Deposition Date 2016-01-15

Release Date 2016-03-02

Last Version Date 2024-11-06

Entry Detail

PDB ID:

5HLL

Keywords:

HYDROLASE

Title:

Re-refinement of 4g4a: room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO.

Biological Source:

Source Organism(s):

Gallus gallus (Taxon ID: 9031)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.70 Å

R-Value Free:

0.22

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 43 21 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Lysozyme C
Gene (Uniprot):LYZ
Chain IDs:A
Chain Length:129
Number of Molecules:1
Biological Source:Gallus gallus

UniProt ID:P00698 Pfam ID:PF00062 EC:3.2.1.17

Ligand Molecules

DMS

NH3

Primary Citation

Re-refinement of 4g4a: room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO.

Tanley, S.W, Schreurs, A.M, Kroon-Batenburg, L.M, Helliwell, J.R, Afonine, P.V, Grosse-Kunstleve, R.W, Echols, N, Headd, J.J, Moriarty, N.W, Mustyakimov, M, Terwilliger, T.C, Urzhumtsev, A, Zwart, P.H, Adams, P.D, Adams, P.D, Afonine, P.V, Bunkoczi, G, Chen, V.B, Davis, I.W, Echols, N, Headd, J.J, Hung, L.W, Kapral, G.J, Grosse-Kunstleve, R.W, McCoy, A.J, Moriarty, N.W, Oeffner, R, Read, R.J, Richardson, D.C, Richardson, J.S, Terwilliger, T.C, Zwart, P.H.Show

Acta Crystallogr F Struct Biol Commun 72 253 254 (2016)

PMID: 26948967 DOI: 10.1107/S2053230X16000856

Abstact

A re-refinement of 4g4a, the room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO is published as an addendum to Tanley et al. [(2012), Acta Cryst. F68, 1300-1306]. This example illustrates the benefits of sharing raw diffraction images, as well as structure factors and molecular coordinates, as the diffraction resolution of the study is now much improved at 1.70 Å.

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Primary Citation of related structures

Abstact

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