5HFT image
Deposition Date 2016-01-07
Release Date 2016-06-29
Last Version Date 2024-03-06
Entry Detail
PDB ID:
5HFT
Keywords:
Title:
Crystal structure of HpxW
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.65 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Gamma-glutamyltranspeptidase
Gene (Uniprot):hpxW
Chain IDs:A, B (auth: C)
Chain Length:364
Number of Molecules:2
Biological Source:Klebsiella pneumoniae subsp. pneumoniae
Polymer Type:polypeptide(L)
Molecule:Gamma-glutamyltranspeptidase
Gene (Uniprot):hpxW
Chain IDs:C (auth: B), D
Chain Length:187
Number of Molecules:2
Biological Source:Klebsiella pneumoniae subsp. pneumoniae
Ligand Molecules
Primary Citation
Biochemical and structural characterization of Klebsiella pneumoniae oxamate amidohydrolase in the uric acid degradation pathway.
Acta Crystallogr D Struct Biol 72 808 816 (2016)
PMID: 27303801 DOI: 10.1107/S2059798316007099

Abstact

HpxW from the ubiquitous pathogen Klebsiella pneumoniae is involved in a novel uric acid degradation pathway downstream from the formation of oxalurate. Specifically, HpxW is an oxamate amidohydrolase which catalyzes the conversion of oxamate to oxalate and is a member of the Ntn-hydrolase superfamily. HpxW is autoprocessed from an inactive precursor to form a heterodimer, resulting in a 35.5 kDa α subunit and a 20 kDa β subunit. Here, the structure of HpxW is presented and the substrate complex is modeled. In addition, the steady-state kinetics of this enzyme and two active-site variants were characterized. These structural and biochemical studies provide further insight into this class of enzymes and allow a mechanism for catalysis consistent with other members of the Ntn-hydrolase superfamily to be proposed.

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Primary Citation of related structures