5H8Y image
Entry Detail
PDB ID:
5H8Y
Title:
Crystal structure of the complex between maize sulfite reductase and ferredoxin in the form-2 crystal
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-12-25
Release Date:
2016-04-13
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Sulfite reductase [ferredoxin], chloroplastic
Chain IDs:A, B, C, D
Chain Length:583
Number of Molecules:4
Biological Source:Zea mays
Polymer Type:polypeptide(L)
Description:Ferredoxin-1, chloroplastic
Chain IDs:E, F
Chain Length:98
Number of Molecules:2
Biological Source:Zea mays
Primary Citation
Structural and mutational studies of an electron transfer complex of maize sulfite reductase and ferredoxin.
J.Biochem. 160 101 109 (2016)
PMID: 26920048 DOI: 10.1093/jb/mvw016

Abstact

The structure of the complex of maize sulfite reductase (SiR) and ferredoxin (Fd) has been determined by X-ray crystallography. Co-crystals of the two proteins prepared under different conditions were subjected to the diffraction analysis and three possible structures of the complex were solved. Although topological relationship of SiR and Fd varied in each of the structures, two characteristics common to all structures were found in the pattern of protein-protein interactions and positional arrangements of redox centres; (i) a few negative residues of Fd contact with a narrow area of SiR with positive electrostatic surface potential and (ii) [2Fe-2S] cluster of Fd and [4Fe-4S] cluster of SiR are in a close proximity with the shortest distance around 12 Å. Mutational analysis of a total of seven basic residues of SiR distributed widely at the interface of the complex showed their importance for supporting an efficient Fd-dependent activity and a strong physical binding to Fd. These combined results suggest that the productive electron transfer complex of SiR and Fd could be formed through multiple processes of the electrostatic intermolecular interaction and this implication is discussed in terms of the multi-functionality of Fd in various redox metabolisms.

Legend

Protein

Chemical

Disease

Primary Citation of related structures