5H6Z image
Deposition Date 2016-11-15
Release Date 2017-11-22
Last Version Date 2023-11-08
Entry Detail
PDB ID:
5H6Z
Keywords:
Title:
Crystal structure of Set7, a novel histone methyltransferase in Schizossacharomyces pombe
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 65 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SET domain-containing protein 7
Gene (Uniprot):set7
Chain IDs:A, B
Chain Length:169
Number of Molecules:2
Biological Source:Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Primary Citation
Set7 Is a H3K37 Methyltransferase in Schizosaccharomyces pombe and Is Required for Proper Gametogenesis.
Structure 27 631 638.e8 (2019)
PMID: 30773398 DOI: 10.1016/j.str.2019.01.011

Abstact

Histone methylation by histone methyltransferases (HMTases) has a key role in transcriptional regulation. Discrepancies between the known HMTases and the histone lysine methylome suggest that HMTases remain to be identified. Here we report the discovery, characterization, and crystal structure of Schizosaccharomyces pombe Set7, an HMTase methylating the uncharted histone H3 lysine 37 (H3K37) mark. Set7 forms a dimer with its substrate-binding site structurally specific to K37, not the neighboring well-studied K36 mark. We also discovered that H3K37 methylation levels dramatically increase during gametogenesis. Set7 deletion mutant cells show defects in gametogenesis and produce the abnormal number of spores with aberrant morphology. S. pombe gametogenesis shares similarities with mammalian spermatogenesis. These findings extend our understanding of epigenetic regulation during gametogenesis and support a link between Set7, the epigenetic H3K37 methyl mark, and proper gametogenesis.

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