5H6G image
Deposition Date 2016-11-11
Release Date 2017-09-20
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5H6G
Keywords:
Title:
Crystal structure of a thermostable lipase from Marine Streptomyces
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.34 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Putative secreted lipase
Chain IDs:A, B, C
Chain Length:271
Number of Molecules:3
Biological Source:Streptomyces sp. W007
Primary Citation
Crystal structure of a lipase from Streptomyces sp. strain W007 - implications for thermostability and regiospecificity
FEBS J. 284 3506 3519 (2017)
PMID: 28857479 DOI: 10.1111/febs.14211

Abstact

UNLABELLED MAS1 from marine Streptomyces sp. strain W007 belongs to the bacterial lipase I.7 subfamily and is characterized as a thermostable and nonregiospecific lipase. To shed light on the catalytic mechanism of MAS1, we determined its crystal structure with closed conformation in two crystal forms at 2.3 Å resolution. MAS1 adopts the canonical α/β hydrolase core fold with its catalytic triad being formed by S109, D200 and H232. Structural analysis and biochemical assays revealed that disulfide bonds and salt bridges play a vital role in the thermostability of MAS1. In addition, we discovered that the replacement of H108 with a tryptophan converts MAS1 from a nonregiospecific to an sn-1,3-specific lipase, suggesting the functional importance of the second position from the conserved pentapeptide motif in defining the regiospecificity of MAS1. Our present study provides insights into the molecular basis for the thermostability and regiospecificity of MAS1, and it may aid in the rational design of thermostable or regiospecific lipases for potential industrial applications. DATABASE Structural data are available in the Protein Data Bank database under the accession numbers 5H6B and 5H6G.

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